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RRBS-seq in Plant

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Introductions

RRBS seq in Plant

Reduced Representation Bisulfite Sequencing (RRBS) is an accurate, efficient and economical method for DNA methylation research. This technology enriches the promoter and CpG island regions by restriction enzymes, and then performs Bisulfite sequencing, which can simultaneously achieve high-resolution detection of DNA methylation status and high utilization of sequencing data. DNA methylation research has always been a hot spot in disease research, breeding research and development research, and it is closely related to gene expression and phenotypic traits. As a cost-effective method for methylation research, RRBS has broad application prospects in the study of large-scale plant breeding samples. RRBS can be used to realize the comparative genomic analysis of multiple samples.

Services

With years of rich experience, Lifeasible provides reduced representation bisulfite sequencing and analysis services. Customers only need to provide tissues or DNA sample, and we complete the entire service process from sample extraction, quality testing, sequencing, biological information analysis to making reports.

Workflow of RRBS-seq in plant

Workflow of RRBS seq in Plant

Analysis content

Analysis content Solved problem
Sequencing data quality assessment Filter out low-quality data to ensure data quality
Reference sequence alignment analysis Analyze the comparison rate and coverage
Methylation site calling Analyze methylation sites
Methylation distribution Distribution of methylation in the genome and functional elements
Differential methylation analysis Find DMR
Find DMR GO/KEGG enrichment analysis of related genes
Personalized analysis, multi-omics association analysis (need to contact us for evaluation)

Sample requirements

  • DNA ≥ 5μg, OD260/280 = 1.8~2.0. There is no obvious degradation and protein contamination of DNA.

Project cycle

  • It takes 60~90 working days to complete the standard process.

Feedback to customers

  • Raw data
  • A project report includes experimental process, instrument parameters, analysis methods and results, etc.

Service process

Service process of RRBS seq in Plant

Advantages

  • Lifeasible specializes in providing services related to agricultural molecular breeding, with standardized systems and scientific management.
  • The experiment adopts a carefully optimized experimental procedure, which has extremely high efficiency and specificity.
  • With a strong bioinformatics team, it can meet the various in-depth data analysis needs of customers.
  • The one-stop service we provide makes your upstream and downstream experiments seamlessly connected, facilitates your experiments more conveniently and quickly.
  • Personalized customized package service.

※ For research or industrial use.

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